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Peptide vaccines

  1. P. Kangueane & M. K. Sakharkar, T-Epitope Designer: A HLA-peptide binding prediction server. BIOINFORMATION 1(1): 21-24 (2005) 1.[PubMed]


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  2. Kangueane P., Sakharkar M.K., Rajaseger G., Bolisetty S., Sivasekari B., Zhao B., Ravichandran M., Shapshak P, Subbiah S. A framework to sub-type HLA supertypes. FRONTIERS IN BIOSCIENCE, 10: 879-886, Jan, 2005. [PubMed]  


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  3. Zhao B, Mathura VS, Rajaseger G, Moochhala S, Sakharkar MK, Kangueane P. A novel MHCp binding prediction model. HUMAN IMMUNOLOGY. 64(12): 1123-1143, Dec 2003. [PubMed]  


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  4. Zhao B, Png AE, Ren EC, Kolatkar PR, Mathura VS, Sakharkar MK, Kangueane P. Compression of functional space in HLA-A sequence diversity. HUMAN IMMUNOLOGY. 64(7): 718-28, Jul 2003.[PubMed]  


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  5. Govindarajan KR, Kangueane P, Tan TW, Ranganathan S. MPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules. BIOINFORMATICS (oxford, England). 19(2): 309-10, Jan 2003.[PubMed]  


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  6. Adrian PEH, Rajaseger G, Mathura V, Sakharkar MK, Kangueane P. Types of inter-atomic interactions at the MHC-peptide interface - Identifying commonality from accumulated data. BMC STRUCTURAL BIOLOGY. 2: 1-14, May 2002.[PubMed]  


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  7. Kangueane P, Sakharkar MK, Kolatkar PR, Ren EC. Towards the MHC-peptide combinatorics. HUMAN IMMUNOLOGY. 62(5): 539-56, May 2001[PubMed]  


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  8. Kangueane P, Sakharkar MK, Lim KS, Hao H, Lin K, Ren EC, Kolatkar PR. Knowledge-based grouping of modeled HLA peptide complexes. HUMAN IMMUNOLOGY. 61(5): 460-6, May 2000.[PubMed]  


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  9. Ren EC, Kangueane P, Kolatkar P, Lin MT, Tseng LH, Hansen JA. Molecular modeling of the minor histocompatibility antigen HA-1 peptides binding to HLA-A alleles. TISSUE ANTIGENS. 55(1): 24-30, Jan 2000.[PubMed]  


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  10. Kangueane P and Sakharkar MK. Grouping of HLA alleles using electrostatic distribution of the peptide binding groove. IMMUNO-INFORMATICS: PREDICTING IMMUNOGENICTY IN SILICO. THE HUMANA PRESS INC. Edited by Flower R. Darren [PubMed]  


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  11. Kangueane P and Sakharkar MK. Structural basis for HLA-A2 super-types IMMUNO-INFORMATICS: PREDICTING IMMUNOGENICTY IN SILICO. THE HUMANA PRESS INC. 2005, Edited by Flower R. Darren [PubMed]  


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  12. Kangueane P and Sakharkar MK. HLA-peptide binding prediction using structural and modeling principles. THE HUMANA PRESS INC. IMMUNO-INFORMATICS: PREDICTING IMMUNOGENICTY IN SILICO. 2005, Edited by Flower R. Darren [PubMed]  


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  13. Sowmya G, Vaishnai A, Kangueane P, Structure modeling based computer aided T-cell epitope design (2008) BIO-ALGORITHMS AND MED-SYSTEMS, 4(8): 5-13 (Invited opening paper) [PubMed]  


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  14. P. Kangueane, Designing Short Peptides as Viral Vaccines, (2009) J PROTEOMICS BIOINFORM S3:6 ISSN: 0974-276X JPB. [PubMed]  


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  15. Mohanapriya A, Nandagond S, Shapshak P, Kangueane U., Kangueane P, A HLA-DRB supertype chart with potential overlapping peptide binding function (2010) BIOINFORMATION 4 (7): 300-309.[PubMed]  


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  16. Mohanapriya A, Lulu S, Kayathri R, Kangueane P, Class II HLA-peptide binding prediction using structural principles, (2009) HUMAN IMMUNOLOGY, 70:159-169. [PubMed]  


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  17. Kangueane P, Sakharkar MK HLA-peptide binding prediction using structural and modeling principles., METHODS IN MOLECULAR BIOLOGY (Clifton, N.J.), 409: 293-299 (2007)[PubMed]  


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  18. Kangueane P, Sakharkar MK, Grouping of class I HLA alleles using electrostatic distribution maps of the peptide binding grooves., METHODS IN MOLECULAR BIOLOGY (Clifton, N.J.), 409: 175-181 (2007).[PubMed]  


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  19. Kangueane P, Sakharkar MK, Structural basis for HLA-A2 supertypes., METHODS IN MOLECULAR BIOLOGY (Clifton, N.J.), 409: 155-162 (2007)[PubMed]  

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